Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNPAIQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGL--TDCCLK---------TYSQVGFRGFYKGTS--PALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAK-----------------LSDLQNAAAGSFASAFAALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRS------------------KDELGPVPLMLSGGVGGICLWLAV----------YPVDCIKSRIQVLSMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLMMNQLEAY |
| 3J9T Chain:Q ((1-345)) | MEGVYFNIDNGFIEGVVRGYRNGLLSNNQYINL-TQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAP------YFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFLETGNLEDHFYQLEMELCRDAFTQQF-----AISTVWAWMKSKEQEVRNITWIAECIAQNQRER--INNYISVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74464 for 2022 contacts (-36.8/contact) +
2D Compatibility (PS) -28888 + (NN) 2536 + (LL) 1588
1D Compatibility (HY) -4800 + (ID) 2150
Total energy: -106178.0 ( -52.51 by residue)
QMean score : ?
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