Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLGRRLVLSQWLGILATIAGLVVVGLADLLSKHDSQHKLSEVITGDLLIIMAQIIVAIQMVLEEKF--VYKHNVHP--LRAVGTEGLFGFVILSLLLVPMYYIPAGSFSGNPRGTLEDALDAFCQVGQQPLIAVALLGNISSIAFFNFAGISVTKEL-SATTRMVLDSLRTV-VIWALSLALGWEAFHALQILGFLILLIGTALYNGLHRPLLGRLSRGRPLAEESEQERLLGGTRTPINDAS |
| 1YE8 Chain:A ((2-178)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDVILEDILSLLER--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160329 for 1263 contacts (-126.9/contact) +
2D Compatibility (PS) -16568 + (NN) 4401 + (LL) 14308
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -161588.0 ( -127.94 by residue)
QMean score : 0.166
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