Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAALFDKIG--PGVFITHSQGGPVGWNTLLK-TRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 1IMJ Chain:A ((2-209)) | ---------------------AASVEQREGTIQVQGQALF------------FREALPGSGQARFSVLLLHGIRFSSETWQ-----NLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPG------------------------------------------------SFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKIN------------------------AANYASVKTPALIVYGDQDP----------------MGQTSFEHLKQL-PNHRVLI-----MKGAGHPCYLDK-PEEWHTGLLDFLQGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130583 for 1801 contacts (-72.5/contact) +
2D Compatibility (PS) -23303 + (NN) -19116 + (LL) 8480
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -171322.0 ( -95.13 by residue)
QMean score : 0.256
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