Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
2DGT Chain:A ((76-146))
----------------------------------ASTKLHVGNISPTCTN---QELRAKFEEYG-PVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS-------------------
General information:
TITO was launched using:
RESULT:
Template:
2DGT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47413 for 526 contacts (-90.1/contact) +
2D Compatibility (PS) -7956 + (NN) -2568 + (LL) 3940
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -56347.0 ( -107.12 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2DGT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DGT-query.scw
PDB file :
Tito_Scwrl_2DGT.pdb
: