Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKFSHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLS-DFLNKTTTDQ--WGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 1JMX Chain:A ((364-494)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVEEVKVVPAFSIARIGE----NGASVPKVQGRFEAEAWGKDANGQPLRIGYLPASWKVEPFNERAVEDEDVKFAGKMQADG-VFVPGGAGPNPERKMMTNNAGNLKVIATLADGGQ----TGEGHMIVTVQRWNNPPLP---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32483 for 912 contacts (35.6/contact) +
2D Compatibility (PS) -13612 + (NN) -800 + (LL) 14884
1D Compatibility (HY) 0 + (ID) 600
Total energy: 32355.0 ( 35.48 by residue)
QMean score : 0.051
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