Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSVDEGILTLEISRSLPEVGSGSSFYLTEK
2V0F Chain:A ((2655-2682))
-----------------------------------------------GKKMGGA-MAPPMKDLPRWLEENP--EFAVA-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2V0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7385 for 117 contacts (-63.1/contact) +
2D Compatibility (PS) -3001 + (NN) -3330 + (LL) 4544
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -11572.0 ( -98.91 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_2V0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V0F-query.scw
PDB file :
Tito_Scwrl_2V0F.pdb
: