Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEGVSYSDGHFLTKSGG--VINFRKTRVTSITITILGNYGLRVVNGELQNTPLTFKGADFK------SSTLKDELLIPLEGAVQLNTAPSTALCIFITTDHVYRELCMMQFLTDVDKTPFLVVLRSESKHETIQYMHIVTVHPFLSLTA
2HFT Chain:? ((107-218))
-------------NLGQPTIQSFEQVG-TKVNVTVEDERTLVRRNNTFLSLRDVF-GKDLIYTLYYWKSSGKKTAKTNTNE-FLIDVDKGENYCFSVQA--------VIPSRTVNRKST-------DSPVECMG---------------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19655 for 530 contacts (-37.1/contact) +
2D Compatibility (PS) -9940 + (NN) -2259 + (LL) 3712
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -30142.0 ( -56.87 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: