Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTTSTRQGSRVVGFMDFIIALGWQIIPSNIRYIYILNCSQFMPTSDVTTIYFQA---DSGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ--
1SFP Chain:? ((4-114))
--LPRNTNCGGIL--KEESGVIATYY--GPKTNCVWTIQ----MPPEYHVRVSIQYLQLNCNKESLEIIDG----LPGSPVLGKICEGSLMDYRSSGSIMTVKYIRE--PEHPASFYEVLYFQDPQA
General information:
TITO was launched using:
RESULT:
Template:
1SFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55769 for 733 contacts (-76.1/contact) +
2D Compatibility (PS) -11880 + (NN) -9111 + (LL) 1188
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -79472.0 ( -108.42 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1SFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFP-query.scw
PDB file :
Tito_Scwrl_1SFP.pdb
: