Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------GALTAQGASFFTAAPLSYNTG----NSTISLDYRSPQLRVSGGALALTSPVFVYQT----PFNTPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDVTGETNATGTQTWELQFDGTLGSCLTGRMQVMGGTGEELDVTP---------TFILPTSDKSVYKQGFMPIVC-SENGEFKQSTYCSY------------ALTYRLGNFYITLKSTTSGCKPIFQMSFMYESQIGIV- |
| 1QEX Chain:A ((1-288)) | MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSITEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMF-GQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72180 for 1239 contacts (-58.3/contact) +
2D Compatibility (PS) -21624 + (NN) -3845 + (LL) -76
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -106075.0 ( -85.61 by residue)
QMean score : 0.233
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