Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MDSLVKIMG-SFLALSLIMIFS---SCIVNE----HVDEGNIKENAVRMMECIVN-------KD-------------------SEKLFDFYNKDMKDNYKDSSLDEIRQLFEYIDGAITSYNY---EGKGGGQEAKNDGIICYYSC---HP-----EFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEKLIIGRNYYKE |
| 1OJQ Chain:A ((1-212)) | AETKNFTDLVEATKWGNSLIKSAKYSSKDKMAIYNYTKNSSPINTPLRSANGDVNKLSENIQEQVRQLDSTISKSVTPDSVYVYRLLNLDYLSSITGFTREDLHMLQQTNNGQYNEALVSKLNNLMNSRI--YRENGYSSTQLVSGAALAGRP-IELKLELPKGTKAAYIDSKELTAYPGQ-QEVLL------PRGTEYA-VGSVKLSDN---KRKIIITAVVFKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47804 for 905 contacts (-52.8/contact) +
2D Compatibility (PS) -16847 + (NN) -12052 + (LL) 196
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -81407.0 ( -89.95 by residue)
QMean score : 0.250
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