Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MGPVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSISFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDLAQGAHTITKADACNLFYMEYAAHHHHHH |
| 4DT5 Chain:A ((1-143)) | GYSCRAVGVDGRAVTDIQGTCHAKATGAGAMASGTSEPGSTSTATATGRGATARSTSTGRGTATTTATGTASATSNAIGQGTATTTATGSAGGRATGSATTSSSASQPTQTQTITGPGFQTAKSFARNTATTTVTASHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6028 for 1154 contacts (-5.2/contact) +
2D Compatibility (PS) -12474 + (NN) 3483 + (LL) 0
1D Compatibility (HY) 11600 + (ID) 1300
Total energy: -4719.0 ( -4.09 by residue)
QMean score : 0.139
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