Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGV---SEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYS--AP-QRAAMLALSRDFGR |
| 1QAP Chain:A ((8-296)) | -------------------------------------------------------------DDRRDALLERINL--DIPAAVAQALRED--------LGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHAN--QTVFELQGPARVLLTG--------------------ERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGL-----RTALKYAVLCGGGANH-----RLGLTDAFLIKENHIIASGSV-RQAVEKAFWLHPDVPVEVEVE--------NLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQA--------RLEVSGNVTAETLREFA---ETGVDFISVGALTKHVRALDLSMRFC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30893 for 2177 contacts (-14.2/contact) +
2D Compatibility (PS) -30314 + (NN) -7120 + (LL) 9992
1D Compatibility (HY) -4400 + (ID) 2100
Total energy: -64835.0 ( -29.78 by residue)
QMean score : 0.092
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