Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGS------------AADLEKVKSLVEFILYQRA-DNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGN------------SQAYALLVAGNRLGDRDMIKAAFNELDHFHP--WLISNG------LLNEFTVRQQGEKVTLIEQKKF---SQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALL--TLQLIESIPDAKRMLESALEKRNIKQ-------------- |
| 1KRE Chain:A ((36-510)) | SNQAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADSRNGWGASAVDALSTAVIMGKADVVNAI----LEHVADIDFS----KTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDG--ATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSS--EPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTF--LSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDP--KKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRT------DSGFAAVSDVNKANGGSKYDNQES---FLFAEVMKYSYLAHSEDAAW--QVQKGGKNTFVYNTEAHPISVAR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39883 for 3316 contacts (-12.0/contact) +
2D Compatibility (PS) -42103 + (NN) -21827 + (LL) 2432
1D Compatibility (HY) 4000 + (ID) 2350
Total energy: -99731.0 ( -30.08 by residue)
QMean score : 0.241
|
|
|