Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG-----------
1UEB Chain:A ((1-184))
MIS-VTDLRPGTKVKMDGGLWECVEYQHQKLGRGGAKVVAKFKNLET-------GATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVGAEFFKE-----------------------GMTALGDMYEGQPIKVTPPTVVELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYVGRA
General information:
TITO was launched using:
RESULT:
Template:
1UEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167036 for 1168 contacts (-143.0/contact) +
2D Compatibility (PS) -17861 + (NN) 9741 + (LL) 1744
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -175412.0 ( -150.18 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_1UEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEB-query.scw
PDB file :
Tito_Scwrl_1UEB.pdb
: