Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
3TO5 Chain:A ((14-59))
----------------------------------------------------------KILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFD------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21638 for 258 contacts (-83.9/contact) +
2D Compatibility (PS) -4941 + (NN) -3895 + (LL) 6372
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -26102.0 ( -101.17 by residue)
QMean score : 0.041
(partial model without unconserved sides chains):
PDB file :
Tito_3TO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TO5-query.scw
PDB file :
Tito_Scwrl_3TO5.pdb
: