Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVL-QKPSEGEDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA
1PVE Chain:A ((16-57))
-----------------------------------------QQMRQIIQQNPSLLPALLQQIGRENPQ----LLQQISQHQEHFIQM------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7579 for 198 contacts (-38.3/contact) +
2D Compatibility (PS) -4479 + (NN) -2133 + (LL) 8116
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -9225.0 ( -46.59 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_1PVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PVE-query.scw
PDB file :
Tito_Scwrl_1PVE.pdb
: