Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHLIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEILEQDISHI-NANPKMGRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS
2F4M Chain:B ((13-55))
---------------------------------------FQQMRQIIQQNPSLLPALLQQIGRENPQ----LLQQISQHQEHFIQM------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2F4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5291 for 201 contacts (-26.3/contact) +
2D Compatibility (PS) -4581 + (NN) -2881 + (LL) 7952
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -9251.0 ( -46.02 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_2F4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F4M-query.scw
PDB file :
Tito_Scwrl_2F4M.pdb
: