Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----PYLKEKS-SATVYFQTVKHNNIRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVL----------LDQGGVKLFQEMCDKVQISDSHLKNISIRSVEGE----IYCAKSGRKFAGQIREKFIISDWRFVL--SGSYSFTWLCGHVHRNILSKFTGQAVELFDEEFRHLYASSKPVMGLKSP
1M6I Chain:A ((144-280))
PRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSIT-IIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKV--MPNAIVQSVGVSSGKLLIKLKDGRKVET-----------DHIVAAVGL----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1M6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112391 for 799 contacts (-140.7/contact) +
2D Compatibility (PS) -12377 + (NN) -3039 + (LL) 4440
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -125467.0 ( -157.03 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1M6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M6I-query.scw
PDB file :
Tito_Scwrl_1M6I.pdb
: