Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
1V1P Chain:B ((140-209))
--EEISLKELDFKIRQQLVNNYGLYKGTSKYGKIIINLKDENKVEIDLGDKLQFERMGDVLNSKDIRGISVT--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1V1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -393 for 409 contacts (-1.0/contact) +
2D Compatibility (PS) -7652 + (NN) -6010 + (LL) 2400
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -13605.0 ( -33.26 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1V1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V1P-query.scw
PDB file :
Tito_Scwrl_1V1P.pdb
: