Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MTHQDLSITAKLINGGVAG----LVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARA-EGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLM---------EDGMQRNLKMEMLA-----------GCGAGMCQVVVTC---PMEMLKIQLQDAGRL--AVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWE-LLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAV---TPLDVLKTRIQTLKKGLGEDMYSGI---------TDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYF----IGIGERILKCFD |
| 4FDT Chain:A ((21-425)) | MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGKLSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYVPRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVAIA-WPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQRIWVKILLNE-EAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105390 for 2209 contacts (-47.7/contact) +
2D Compatibility (PS) -32029 + (NN) -868 + (LL) 224
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -148963.0 ( -67.43 by residue)
QMean score : 0.168
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