Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLG----YFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIH-PNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSPSGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ |
| 3J6V Chain:I ((68-396)) | ---------------------------------------------------------SYTVDFIKKQIEEFNIGKRHLANMMGE-DPETFTQEDVDRAITYLFPSGLFEKRARPIMKH-PEEIFPKQRAVQWGE-DGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEERQDQLRAKGLFSE--------KSKSKDLIGSRWLIKEELEEMLVEKL--------------------SDQDYAQFIRLLERLSALPCDAAEEEFVGRFRRTVTVQSKKHLI------EPLQYDEQGMAFSTGQGKRKTANAEAVVYGHG---------SGKIEINGVD---YLLYFPVTQDREQLM-FPFHF--LDRL---------GKHDVTCTVSG----------GGRSSQAGAIRLAMSRALCSFIT------EDEVEWMRQAGLLTTDP-RVRERKKPGQEGARRKFTWKKR-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204450 for 2603 contacts (-78.5/contact) +
2D Compatibility (PS) -32743 + (NN) 479 + (LL) 15116
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -230648.0 ( -88.61 by residue)
QMean score : 0.132
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