Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MELRSGSVGSQAVARRMDG-DSRDGGGGKDATGSEDYENLPTSASV-STHMTAGAMAGILEHSVMYPV-DSVKTRMQSLSPD-PKAQYTSIYGALKKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFACYENMKRTLNDVFHHQGNSHLANGIAG-SMATL--LHDAVMNPAEVVKQR--------LQMYNSQHRSAISCIRTVW-RTEGLGAFYR-SYTTQLT-MNIPFQSIHFITYEFLQEQVNPHRTYNPQSHIISGG--LAGALAAAATTPLD------VCKTLLN------TQENVALSLANIS---GRLSGMANAFRTVYQL-NGLAGYFKGIQARVIYQMPSTAISWSV-------YEFFKYFLTKRQLENRAPY-- |
4PEV Chain:A ((52-421)) | PISVLVLFDVGGRGDLS----FNDMAALGADRAAEELGVDVVFQTPQSLAVMESVLDAASRSG--EYDLIVLVGFLWQEPLEKVAPRYPEQKYALIDAATRE---------RYDNVASYLFREQEVASLVGIIAADI---ANNISKATGEEAKAGAVAGMDIPPLWRFHIGYLYGVQYYNQAMGTDVEMVWTYTGRFDDPTLGKTTAEQMLQQGVRVFYGVAGLTHVGMFNAVKEAAARGVIAFSIGQDASQEWYDPQTIIISGLKRVDVAVYTAIKDVVEGRFRGGIVSLGLKEGGLGLSDEEIIRYFAEIAAETGQLPEGLTPEKVVEIVMSQREKWISNDGWRLVEELKQKIISGEIKFVTPQDHDTYDSIIEELKAGNLEAALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4478 for 2564 contacts (-1.7/contact) +
2D Compatibility (PS) -31375 + (NN) 7878 + (LL) 2016
1D Compatibility (HY) 10800 + (ID) 700
Total energy: -15859.0 ( -6.19 by residue)
QMean score : 0.041
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