Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MELEGRGAGGVAGGPAAGPGRSPGESALLDGWLQRGVGRGAGGGEAGACRPPVRQDPDSGPDYEALPAGATVTTHMVAGAVAGILEHCV----------MYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEGLW-------RPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAEVV-------------KQRMQMYNSPYHRVTDCVRAV------WQNEGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNTQESLAL-NSHITGHITGMASAFRTVYQVGGVTA--YFRGVQARVIYQIPSTAIAWSVYEFFKYLITKRQEEWRAGK-------------------- |
| 4EEI Chain:A ((1-433)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALEDRMVPKG----TAAEIRARAQ------IRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFS-GAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFKKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVESFSKKLQKVMHDEHNIILDIPEMDFEGIKKTYLKEIDHVFDRSVKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127530 for 2580 contacts (-49.4/contact) +
2D Compatibility (PS) -35591 + (NN) 11667 + (LL) -824
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -162728.0 ( -63.07 by residue)
QMean score : 0.181
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