Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MAKVNRARSTSPPDGGWGWMIVAGC-----FLVTICT------------RAVTRCISIF---FVEFQTYFTQDYAQTAWIHSIVDCVTMLCAPLGSVVSNHLSCQVGI--MLGGLLASTGLILSSFATSLKHLYLTL-GVLTGLGFALCYSPAIAMVGKYFSRRKALAYGIAMSG----------S-GIGTFILAP-VVQLLIEQFSWRGALL-ILGGFVLNLCVCGALMRPITLKEDHTTPEQNHVCRTQKEDIKRVSPY-SSLTKEWAQ---------------------TCLCCCL-QQEYSFLLMSDFVVLAVSVLFMAYGCSPLFVYLVPYALSVGVSHQQAAFLMSILGVIDIIGNITFGWLTDRRCLKNYQYVCYLFAVGM-DGLCYLCLPMLQSLPLLVPFSCTFGYFDGAYVTLIPVVTTEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGRLVDTTGSYTAAFLLCGFSMIFSSVLLGFARLIKRMRKTQLQ-FIAKESDPKLQLWTNGSVAYSVARELDQKHGEPVATAVPGYSLT |
| 3VWA Chain:A ((1-540)) | PLHMSISNFQFPYTIEETAITETAL-----WQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCTVLETFDSDPQSTFIVTERV--VPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTL--SKDSVFINIKGEWVLFGLELCSSKE-GLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCL--PKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIKDPQGKLVVMSNLENLYLESREIFRNLTPGMIENFIIPELCEIIKLLMTQSISSNASHKLVPFLAIVLDLTSETNTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLSKSEISSR--------IYPHFIQGLTDSDATLRLQTLKTIPCIVSC-LTERQLNNELLRFLAKTQVD----SDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLK-DPQVKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLL--DKSPIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -408393 for 3351 contacts (-121.9/contact) +
2D Compatibility (PS) -46310 + (NN) 693 + (LL) 1628
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -472232.0 ( -140.92 by residue)
QMean score : 0.142
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