Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MASVLSYESLVHAVAGAV--GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNF-----VYFYTFNSLKALWVKGQHST-TGKDLVVGFVA--GVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGI--------SALWNGTFPSLLLVFNPA------IQFMFYEGLKRQLLKKRMKLSSLD---VFIIGAVAKAIATT----------VTYPLQTVQSILRF---GRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH |
| 3JWD Chain:A ((1-369)) | TEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLL-NGSLAEEEVVIRSVNF-TDNAKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIV-----THWFNCGGEFFYCNSTQLFNSTWFNSTEGSDTITLPCRIKQIINMWQKVGKAMYAPPIS--GQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELY-KYKVVKIEPLGVAPTKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156011 for 2090 contacts (-74.6/contact) +
2D Compatibility (PS) -30798 + (NN) 7371 + (LL) 1260
1D Compatibility (HY) -1200 + (ID) 2200
Total energy: -181578.0 ( -86.88 by residue)
QMean score : 0.068
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