Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSVGSQRLEEPSVAGTPDPGVVMSFTFDSHQLEEAAEAAQGQGLRAR-----GVPAFTDTT--LDEPVPDDRYHAIYFAMLLAGV-----------GFLLPYNSFITDV-DYLHHKYPGTSIVFDMSLTYILVALAAVLLNNVLVERL--TLHTRITAGYLLALGPLLFISICDVWLQLFSRDQAYAINLAAVGTVAFGCTVQQSSFYG--------YTGMLPK------RYTQGVMTGESTAGVMISLSRILTK-------------LLLPDERASTL-----IFFLVSVAL--------ELLCFLLHLLVRRSRFVLFYTTRPRD-----------SHRGRPGLGRGYGYRVHHDVVAGD----------VHFEHP----APALAPNESPKDSPAH-------------EVTGSGGAYMRFDVPRP------RVQRSWPTFRALLLHRYVVAR--------VIWADMLSIAVTYFIT---LCLFPGLESE-------IRHCIL---GEWLPILIMAVFNLSDFVGKILAALPVDWRGT-------------------------HLLACSCL-------RVVFI--PLFILCVYPSGMPALRHPAWPCIFS-------------LLMGISNGYFGSVPMILAA-GKVSPKQRELAGNTMTVSYMSGLTLGSAVAYCTY---------SLTRDAHGSCLHASTANGSILAGL------- |
| 4OK4 Chain:A ((30-733)) | ----------HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGFLYQVTGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQSLNEAVWLVYSIQGYDAIIDGLAAEEKQEIESGVFLPMAKFLSVESPETFNKIHNLGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNILLKAVYTTIDLSYAGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRISLTGDGLKVAKAVGEGLTQPYNYR---SILLGDGADGDQGALSIHRLGEGHNHMALVAKNTSQGMGHGHFDKLNWLLYDNGNEIVTDYGAARYLNVEAKYGGHYLAENNTWA--KQTIAHNTLVVNEQSHFYGDVTTADLHHPEVLSFYSGEDYQLSSAKEANAYDGVEFVRSMLLVNVPSLEHPIVVDVLNVSADKASTFD-LPLYFNGQIIDFSFKVKDNKNVMKMLGKRNGYQHLWLRNTAPVGDASERATWILDDRFYSYAFVTSTPSKKQNVLIAELGANDPNYNLRQQQVLIRRVEKAKQASFVSVLEPHGKYDGSLETTSGAYSNVKSVKHVSENGKDVVVVDLKDGSNVVVALSYNANSEQVHKVNAGEEAIEWKGFSSVVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -369741 for 3968 contacts (-93.2/contact) +
2D Compatibility (PS) -54315 + (NN) -5191 + (LL) 1108
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -447839.0 ( -112.86 by residue)
QMean score : 0.158
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