Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVG-SLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIG--PKGQRIFLILRGVLGSTAMMLIYYAY---QTMSLADATVITFSSPVFTSIFAWIC----LKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKWYQSSK |
| 3ZUY Chain:A ((2-309)) | ---------NILSKISSFIGKTFSLWAALFAAAAFF-------------------------APDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAS---KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTG----LPYDAQKTLTIEVGMQ--------------------------NSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -324415 for 2700 contacts (-120.2/contact) +
2D Compatibility (PS) -30595 + (NN) -186 + (LL) 4036
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -365410.0 ( -135.34 by residue)
QMean score : 0.306
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