Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MKQAGF------PLGILLLFWVSYVTDFSLVLLIKGG--------ALSGTDTYQSLVNKTFGFPGYLLLSVLQ----FLYP---FIAMISYNIIAGDTLSKVFQRIPGVDPENVFIGRHF-----------IIGLSTV------TFTLPLSLYRNI-----------AKLGKVSLISTGLTTLILGIVMARAISLGPHIPKTEDAWVFAKPNAIQAVGVMSFAFICHHNSF---------LVYSSLEEPTVAKWSRLIHMSIVISVFICIFFATCGYLTFTGFT-----------QGDLFENYCRNDDLVTFGRFCYGVTVILTYPMECF-------VTREVIANVFFGGN----LSSVFHIVVTVMVITVATLVSLL-IDCLGIVLELNGVLCATPLIFII----PSACYLKLSEEPR-----------------THSD---------KIMSCVML---PIGAVVMVFGFVMAITNTQDCTHGQEMFYCFPDNFSLTNTSESHVQQTTQLSTLNISIFQ----------------------------------------------- |
| 4Q86 Chain:A ((2-583)) | TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFY--DPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISL-PEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLF----KQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -304342 for 2730 contacts (-111.5/contact) +
2D Compatibility (PS) -41531 + (NN) 129 + (LL) 16
1D Compatibility (HY) -18800 + (ID) 3400
Total energy: -367928.0 ( -134.77 by residue)
QMean score : 0.090
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