Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGLTASDVHPTLGVQLFSAG--IAACLADVITFPLDTAKVRLQVQGECPTSSVI------RYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAG------KETAPSLGSKILAGLTTGGV-----------AVFIGQPTEVVKVRLQA--QSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTP-NLMRSVIINCTELVTYDLMKE---AFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRFINS---PPGQYKSVPNCAMKVF-------------------------TNEGPTAFFKGLVPSFLRLGSWNVIMF---VCFEQLKRELSKSRQTMDCAT---- |
| 4UVJ Chain:A ((2-387)) | ---DSVKEIVLPLFYDLLNAASILCPLLESFITFSETELKKITDKTIKAFMDSTIGNSKVDMKYDIFAKFIHHIHHFEK----KELQEKFLNQI--ATLKIHLKKFLQEKMDPNNSRDDYKDLTCSLYELYINKLTILGRDYPIEVDEELLQLFLNNFVSRIPIMFQDFDDSTAQEINFKMLVLLATWNLEKWREIIEKVRDLRSVWKPIAAIIGRLNTLVISLAATNETFENINSLFYLKWSACTSLMDIIVAIKIFELKLPADATTWRYSMSEQFPFYLHDNASKVLLKIFLYLESLFAKQVDVQLERVADEDANLNDLPETGFFENIETEFLLFTVKLKGLMKLNILDERFASRVALNKEKLGPLFKKIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114651 for 2054 contacts (-55.8/contact) +
2D Compatibility (PS) -30168 + (NN) -1682 + (LL) 348
1D Compatibility (HY) -14800 + (ID) 2400
Total energy: -163353.0 ( -79.53 by residue)
QMean score : 0.175
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