Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MYMKKLKFITL-TLAIIITLPMLQSCLDDNDHQSRSLV-ISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
| 3NQI Chain:A ((9-246)) | PQQWAGVVKVNDRMGYVTFTDAAGTELIPTNTIPVTLNARMAYIYCQVDEGQKSIKITLLADPTGIDATAITTPKVGESGDVTTNAPVGSLSFVSGYSTVAPFQFSENTIVLPVLYRVKNVTTTEDIKNELAKHTFTLVCYTDD---------IKSGDTILKLYLRYKVEDEPAAIAERATRTSSFKAYEISQILREYTLKSGQTKPAKITIVAQQNEYNNKLEDTSTIEKVYEIE----YKTAE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11940 for 1662 contacts (7.2/contact) +
2D Compatibility (PS) -24401 + (NN) 1396 + (LL) 912
1D Compatibility (HY) 2400 + (ID) 950
Total energy: -8703.0 ( -5.24 by residue)
QMean score : 0.133
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