Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEKDAIEFSKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGVEVFVHCDDHDIVFNASIPFDKSIIESDSSLRSEDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENAIMKTQNSGFRNEYYYLTAIPYTLDEYKRYFQPLIKEDDKSFRDGMRNSKKQLKDKSRPYVVTTLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQISNKYINTKRPNYSKKEVIEVGVFNHEKANTND |
| 4A18 Chain:M ((35-78)) | ----------------------------------------------------------------------------FAEFLKSKIKVGGKLGNL---GEN--ITISNDDKKINVQSTIPFSKRYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27986 for 209 contacts (-133.9/contact) +
2D Compatibility (PS) -4966 + (NN) -3310 + (LL) 16248
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -23764.0 ( -113.70 by residue)
QMean score : 0.062
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