Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYT---EVQTR-GTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTN--LRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKFSHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDN-DTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGT--TNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLPK---NTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 3T2L Chain:A ((17-297)) | -----------------------------LRVPLQVSSAVIKQEVVTRLAP--DPVPLTEG-AIGIFLSGTEPE------DSGY-KVIDNRKYVYSEGHWGPPTANDTIYLV-GNDADVCAYYPYKDSY---------------TDKTVIPLQSQ---DYVETEDIYYALNTMI-----NGFTPAITFDMVHAYSLVELKISRENYFM----PCEISKITLKN--SNLIKKGTINIAVDGSIHSSET-GNYDL--TTV----TD---------ASPHTL--SV----GESYVCRVLMIPVPLKIERTDAEGGEFGLSVSLVI---DG---------QQMLVEIPYSELGEFRQGEKYVIGLKIKGTEIV--PTVKALEWEDE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92888 for 1842 contacts (-50.4/contact) +
2D Compatibility (PS) -28201 + (NN) -1519 + (LL) 4912
1D Compatibility (HY) -14800 + (ID) 2300
Total energy: -134796.0 ( -73.18 by residue)
QMean score : 0.249
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