Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSVDEGILTLEISRSLPEVGSGSSFYLTEK
2CKC Chain:A ((2577-2606))
-----------------------------------------------GTRLVGE-DAPKNKDLVEWLKLHP--TYTVDMP-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4774 for 124 contacts (-38.5/contact) +
2D Compatibility (PS) -3122 + (NN) -2477 + (LL) 4552
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -8721.0 ( -70.33 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_2CKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CKC-query.scw
PDB file :
Tito_Scwrl_2CKC.pdb
: