Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTQQLYFLNDIGKQKPESIRN---------R-SAACPFCDR-ENLTDILATEG-SIIWLKNKFPTLKD-------------------TFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGV----------------------IVQKNEHIELNISDRPIIGFTEFNIIIEDI---------GCIDELANYIQQTVRYILTDFHKGCS-SYNLFFYYLN--------EKIICKVVPRFVVSP-------LY-VGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE |
| 1GUP Chain:A ((17-340)) | LTGQWILVSPHRAK-RPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELG--KTYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH-WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLF--QCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAE-TQRDLTAEQAAERLRAVSD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99515 for 1801 contacts (-55.3/contact) +
2D Compatibility (PS) -26570 + (NN) -9499 + (LL) 1680
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -137804.0 ( -76.52 by residue)
QMean score : 0.299
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