Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVS-PSR--A-------FDGEWVSTFSPG-TPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
2KNR Chain:A ((9-92)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSALIRRVFAAGGFAAVEKKGA--EAAGAIFVRQRLRDGRENLYGPAPQSFADDEDIMRAERRFETRLAGVEGEEIAALLERERRF--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19904 for 370 contacts (-53.8/contact) +
2D Compatibility (PS) -7968 + (NN) -5600 + (LL) 12852
1D Compatibility (HY) 2000 + (ID) 450
Total energy: -19070.0 ( -51.54 by residue)
QMean score : 0.012
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