Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQ---GIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVR----------VGNDIT----VDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPM------EEMLEATKSWQESGFNVFSGGDLRRMGIS-------AATVAALGQALSDPAAE--------VAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGS----GEAWLAICPATPQLVQVG---VKTVLDTLPYGEWKTHSRV---- |
| 1FOB Chain:A ((1-334)) | ----------ALTYRGAD-ISSLLLLEDEGYSYKNLNGQTQALETILADA-GINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT-WADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLATGEL--LSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEPAWIGNAGLGSSCADNLMVDYTTDEVYESIETLGEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51200 for 2172 contacts (-23.6/contact) +
2D Compatibility (PS) -30863 + (NN) -13261 + (LL) 1244
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -102430.0 ( -47.16 by residue)
QMean score : 0.198
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