Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVAN-IGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFM---------GENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASNIH---YPSKK-MTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 2W1V Chain:A ((55-286)) | -------------------------------KSDNLTRACSLVREAAKQGANIVSLPECFNSPYGT--TYFPDYAEKIP-----------------GESTQKLSEVAKESSIYLIGGSIPEE-----------DAGK-LYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGD-SFSTFDTPYCKVGLGICYDMRFAELAQIYA-QRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG--T-EETILYSDIDL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134385 for 1845 contacts (-72.8/contact) +
2D Compatibility (PS) -22882 + (NN) -6013 + (LL) 13804
1D Compatibility (HY) -5600 + (ID) 2850
Total energy: -157926.0 ( -85.60 by residue)
QMean score : 0.175
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