Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAE-HMHRAPVLLIPCLKGREDES---------AV-------GGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVL----GIPYDEYSQGGLL-PIAYTQGIDFRPAKRLPAESVTHWNGW
3EO8 Chain:A ((1-218))
---GMELQDTIFKRQSVRKFK--NQDVSDEDILKMIKAAGAAPSGKNIQNWHFVVIKRRDLMEKIADVITKKQQEILVEMD-----KVS-VDKANRFRKFVKN-FTLFYLKAPVLVLVFTKVYNPSGYYELELIDAPKETIDKLFIRNPGMQSLGAAIENFTLSAIELGYGSCWLTSQNY--AADEIEAVLEAETGFEK-GEYFLGAMLALGVPEDN-LKSPSKKPVEEICTFI--
General information:
TITO was launched using:
RESULT:
Template:
3EO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110066 for 1343 contacts (-82.0/contact) +
2D Compatibility (PS) -21047 + (NN) -6315 + (LL) 284
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -148044.0 ( -110.23 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_3EO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EO8-query.scw
PDB file :
Tito_Scwrl_3EO8.pdb
: