Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDLP----DIVNMYFDADSCNDTDALSETFAPDAVVEDEGARHQ-GVVAILRWWVAAKKAASYVAEPLESTVDGD---KALVRAKVSGRFPGSP--VTLTYSFTIK-DGRIARLEIQ----------- |
| 1M98 Chain:A ((2-317)) | PFTIDTARSIFPETLAADVVPATIARFKQLSAEDQLALIWFAYLEMGKTITIAAPGAANMQFAENTLQEIRQMTPLQQTQAMCDLANRTDTPICRTYASWSPNIKLGFWYELGRFMDQGLVAPIPEGYKLSANANAILVTIQGIDPGQQITVLRNCVVDMGFDTSKLGSYQRVAEPVVPPQEMSQRTKVQIEGVTNSTVLQYMDNLNANDFDNLISLFAEDGALQPPFQKPIVGKENTLRFFREECQNLKLIPERGVSEPTEDGYTQIKVTGKVQTPWFGGNVGMNIAWRFLLNPENKVFFVAIDLLASPKELLNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46894 for 707 contacts (-66.3/contact) +
2D Compatibility (PS) -11340 + (NN) -4291 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -68825.0 ( -97.35 by residue)
QMean score : 0.459
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