Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTW-----RALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVN-GAFLSWQN----LWHGYGN-------SQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ--- |
| 1WU4 Chain:A ((6-381)) | EGAFYTREYRNLFKEFGYS--EAEIQERVKDTWEQLFGDNP-------KIYYEVGD--DLGYLLDTGNLDVRTEGMSYGMMMAVQ---MDRKDIFDRIWNWTMKNMY---MTEG------VHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTCVHNGEGGPGHPMWNRDNKLIKFIPEVEFSDPSYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYAYYDGTPNDEKGYGHFFSDSYRVAANIGLDAEWFGGSEWSAEEINKIQAFFADKEPEDY-------RRYKIDGEPFEEKSLHPVGLIATNAMGSLA----SVDGPYAKANVDLFW--------------------------NTPVRTGNRRYYDNCLYLFAMLALS---------------GNFKIWFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81459 for 2943 contacts (-27.7/contact) +
2D Compatibility (PS) -37271 + (NN) -18515 + (LL) 5972
1D Compatibility (HY) 2400 + (ID) 1650
Total energy: -130523.0 ( -44.35 by residue)
QMean score : 0.277
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