Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
| 2OQQ Chain:A ((1-42)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------GSAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1825 for 164 contacts (-11.1/contact) +
2D Compatibility (PS) -4665 + (NN) -3035 + (LL) 13736
1D Compatibility (HY) 1600 + (ID) 350
Total energy: 5461.0 ( 33.30 by residue)
QMean score : -0.023
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