Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHA---------------KAEAELAINIKKATSPEETAPKRKHVRS-------CIVYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLRE-AMANRGWIDS-LSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHD-----PNEGYETITDL------MTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVA-------------------ESYGI------YKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKF-YYECSNLRYLTSLITIPKL------------- |
| 2W0C Chain:L ((1-335)) | MIVKKKLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLRTIVRQGVSIKGMNYTSVMLHTEYAQEIEYWVGDLDYS-FQEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29675 for 1532 contacts (-19.4/contact) +
2D Compatibility (PS) -26054 + (NN) 14264 + (LL) 204
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -49611.0 ( -32.38 by residue)
QMean score : 0.042
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