Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDS---MDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
3JZ0 Chain:A ((22-287)) | --------------------------------------------LKQKELIANVKNLTESDE-------RITACMMYGSFTKGEGDQYSDIEFYIFLKHSITSNFDSSNWLFDV-APYLMLYKNEYGTEVVIFDNLIRGEFHFLS-------------------EKDMNIIPSFKDS-GYIPDTKAMLIYDETG-QLENYLSEISGARPNRLTEENANFLLCNFSNLWLMGINVLKRGEYARSLELLSQLQKNTLQLIRMAEKNADNWLNMSKNLEKEISLENYKKFAKTTARLDKVELFEAYKNSLLLVMDLQSHLIEQYNLKV------------------THDILERLLNYISE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24593 for 1974 contacts (12.5/contact) +
2D Compatibility (PS) -27237 + (NN) 806 + (LL) 6732
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -3156.0 ( -1.60 by residue)
QMean score : 0.187
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