Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQY--------------KGIIDCVVRIPKEQGFLSFWR------GNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRH----KQFWRYFAGNLASGGAAGAT----SLCFVYPLDFARTRLAADVGKGAAQRE------FHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVR-----------------------RRMMMQSGRKGADIMYTGTVDCWRKIAKDEG------AKAFFKGAWSNVLRGM--GGAFVLVLYDEIKKYV-------- |
| 1WKV Chain:A ((2-383)) | ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGN-PRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYN-DANFEAHMRGTAREIFVQSRR--GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141910 for 2444 contacts (-58.1/contact) +
2D Compatibility (PS) -30288 + (NN) 1484 + (LL) 628
1D Compatibility (HY) -2800 + (ID) 2100
Total energy: -174986.0 ( -71.60 by residue)
QMean score : 0.242
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