Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTDAA-----VSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQY--------------KGIIDCVVRIPKEQGVLSFWR------GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKR----TQFWLYFAGNLASGGAAGAT----SLCFVYPLDFARTRLA------ADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVR-----------------------RRMMMQSGRKGTDIMYTGTLDCWRKIARDEG------GKAFFKGAWSNVLRGM--GGAFVLVLYDEIKKYT-------- |
| 1WKV Chain:A ((2-383)) | ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGN-PRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYN-DANFEAHMRGTAREIFVQSRR--GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147579 for 2428 contacts (-60.8/contact) +
2D Compatibility (PS) -30174 + (NN) 1586 + (LL) 628
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -181789.0 ( -74.87 by residue)
QMean score : 0.250
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