Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDK------YKQLFMSGVNKEK--------QFWRWFLANLASGGAAGATSLCVVYPL-DFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLV--LYDKIKEFFHIDIGGR----------------------- |
2V7K Chain:A ((4-359)) | TLDRVGVFAATHAAVAASDPLQARALVLQLPGLNRNK---DVPGIVGLLREFLPVRGLPSGWGFVEAAAAMRDIGFFLGSLKRHGHEPAEVVPGLEPVLLDLARATNLPPRETLLHVTVWNPTAADAQRSYTGLPDEAHLLESVRISMAALEAAIALTVELFDVSLRSPEFAQRSDELEAYLQKMVESIVYAYRFISPQVFYDELRPFYEPIRVGGQSYLGPGAVE---------MPLFVLEHVLWGSQSDDQTYREFKETYLPYVLPAYRAVYARFSGEPALIDRALDEARAVGTRDEHVRAGLTALERVFKVLLRFRAPHLKLAERAYEVAPSMLGELLTLTYAARSRVRAALD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102186 for 2359 contacts (-43.3/contact) +
2D Compatibility (PS) -31261 + (NN) -1145 + (LL) 636
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -139356.0 ( -59.07 by residue)
QMean score : 0.246
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