Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARA---EGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLM--EDGMQRNLKMEMLAGCGAGMCQVVVTCP--MEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 1KC6 Chain:A ((1-257)) | SFIKPIYQDINSILIG------------------QKVKRPAAGEPFEKLVYKFLKENLSDLTFKQYEYLNDLFMKNPAIIGHEARYKLFNSPTLLFLLSRGKAATENWSIENLFEEKQNDTADILLVKDQFYELLDVKTRNISK-------SAQAP------------------------NIISAYKLAQTCAKMIDNKEFDL-FDINYLEVDWELN--GEDLVCVSTSFAELFKSE---PSELYINWAAAMQIQFHVRDLDQGFNGT---------REEWAKSYLKHFVTQAEQRAISMIDKFVKPFKKYIL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117905 for 1668 contacts (-70.7/contact) +
2D Compatibility (PS) -24713 + (NN) 3308 + (LL) 4128
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -146132.0 ( -87.61 by residue)
QMean score : 0.243
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