Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVK-------------------GELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVVTQ-VINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSPSGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ |
3J4Q Chain:B ((9-394)) | -GLTELLQGYTVEVLRQQPPDLVDFAVEYFTRLREARRQESDTFIVSPTTFHTQESSAVPVIEEDGESDSDSEDADLEVPVPSKFTRRVSVCAETFNPDEEEEDVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGD-------------DGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIIATSE---------GSLWGLD--------------------RVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVI--------GEKIYKDGERIIAQGEKAD-------------------------------------SFYIIESGEVSILIRSKTKSNKNGGN-------QEVEIAHCHKGQYFGELALV----------------------------------------------TNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSN------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88296 for 2307 contacts (-38.3/contact) +
2D Compatibility (PS) -36833 + (NN) 4088 + (LL) 14580
1D Compatibility (HY) -2400 + (ID) 2900
Total energy: -111761.0 ( -48.44 by residue)
QMean score : 0.155
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