Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMD--RFGPRPVRLVGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTL---MALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNW--PIEAFPAPEEVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLV----TGGQEHETNEQQQKVAETVGFYSSVFGAMQL---------------LCLLTCPLI-----GYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQF-----VTFVLHTIVRGFF----HSAC-----------------GSLYAAVFPSNHFGTLT------GLQSLISAVFALLQQPLFM---AMVGPLK-GEPFWVNLGLLLFSLLGFLLPSYL----------FYYRARLQQEYAANGMGPLKVLSGSEVTA |
| 1IKP Chain:A ((2-606)) | -----EEAFD--LWNECA----------------KACVLDLKDGVRSSRMSVDPAIADTNGQGVLHYSMVLEGGNDALKLAIDN-ALSITSDGLTIRLEGGVEPNKPVRYSYTRQARGSWSLNWLVPIGHEKPSNIKVFIHELNA-GNQLSHMSPIYTIEMGDELLAKLARDATFFVRAHESNEMQ-PTLAISH-AGVSVVMAQKRWSEWASGKVL-CLLDQLDGVYNYLAQQRCNLDDTWEGK---IYRVLAGNPAKHDLDIKPTVISHRLHFPEGGSLAALTAHQACHLPLETFTRHRQPRGAEQLEQCGYPVQRLVALYLAARLSWNQVDQVIRNALASPGSGGDLGEAIREQPEQARLALTLAAAESERFVRQGTGNDEAGAANADVVSLTCPVAAGECAGPADSGDALLERNYPTGAEFLGDGGD-VSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRARSQDLDAIWRGFYIAGDPALAYGYAQDQEPDARGRIRNGALLRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEEEGGRLETILGWPLAER-TVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -345877 for 4285 contacts (-80.7/contact) +
2D Compatibility (PS) -53660 + (NN) 1722 + (LL) 2972
1D Compatibility (HY) -8000 + (ID) 5000
Total energy: -407843.0 ( -95.18 by residue)
QMean score : 0.232
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