Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MELRSGSV-----GSQAVARRMDGDSRDGGGGKDATGSEDYEN---LPTSASVSTHM----------------TAGAMAG--ILEHSVMYP------VDSVKTRMQSLSPDPKAQYTSIYGALKKIMRTEGFWRPLR--GVNVMIMGA--GPAHAMYFACYENMKRTLND----VFHHQGNSHLANGIAGSMAT-----LLHDAVMNP---AEVVKQRLQMYNS-------QHRSAISCIRTVWRTE--GLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQV--NPHRTYNPQSHIISGGLAGALAAAAT-----------------TPLDVCKTLLNTQENVALSLANISGRLSGMANAFRTVYQLNGLA------------------------GYFKGIQAR--------------VIYQMPSTAISWSVYEFFKYFLTKRQLE----NRAPY----------------------- |
| 4TQT Chain:A ((14-490)) | ASKVIKGGTVITADRTFRADILIEDGKIAAIGDSLEGDEVIDASGCYVMPGGIDPHTHLQMPFMGTYSSDDFDTGTAAALAGGTTMVVDFVLPDSEGNLLDALQEWFQKAGK-ARTDYSFHMAITGWNERTFNEMAEVVKRGINTFHFMAYKGALMVNDDEMFASFQRCAELGAMPLVHAENGDIVAQLQAKLMAEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMRVFGEPLIQHLTLD--ESEYHNRDWDYAARRVMSPPFRDKLNQDSLWAGLAAGSLQCVATDHCAFTTEQKRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLT--PNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKISAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFDKGQVTAKPGDGRFIEREPNGAVNRALSQWKEIVAPRKVERSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76997 for 2527 contacts (-30.5/contact) +
2D Compatibility (PS) -34247 + (NN) 104 + (LL) 24
1D Compatibility (HY) 400 + (ID) 3600
Total energy: -114316.0 ( -45.24 by residue)
QMean score : 0.189
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